Fig. 2
From: HyperChIP: identification of hypervariable signals across ChIP-seq or ATAC-seq samples
Evaluating the classifications of samples that are based on top-ranked HVRs identified by different methods. a, b For each method applied to the ATAC-seq data set, the ARI is plotted against the number of top-ranked HVRs that are used to classify the ATAC-seq samples. Each ARI value assesses the consistency between the classification and the true labels of the samples. Proximal and distal regions are separately analyzed and ranked. c Box plots for the ARI values resulting from using a wide range of numbers of top-ranked HVRs to classify the samples. For each method, the sequence of numbers starts with 50 and ends with 5000, with an increment of 50