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Table 4 Comparison of the performance of Hi-C-based binning pipelines: HiCBin and bin3C, and a shotgun-based binning tool MetaBAT2 based on contigs that were not annotated by TAXAassign

From: HiCBin: binning metagenomic contigs and recovering metagenome-assembled genomes using Hi-C contact maps

 

F-score

ARI

NMI

MetaBAT2

0.639

0.512

0.675

bin3C

0.670

0.581

0.691

HiCBin

0.935

0.924

0.890

  1. Note: The optimal values of the results are in bold