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Table 1 Summary of D4h and L4h Iso-seq

From: An improved repertoire of splicing variants and their potential roles in Arabidopsis photomorphogenic development

cDNA library

FL-NC readsa

HQ FL readsb

80% HQ FL reads

Genec

Novel transcriptsd

Splicing isoforms

APA sitese

Iso-seq_D4h

136,643

73,746

57,833

14,176

392

20,805

26,179

Iso-seq_L4h

168,454

88,303

69,636

14,821

398

23,345

28,951

  1. aFL non-chimeric reads (FL-NC) as described in “Methods”
  2. bHigh-quality FL reads (HQ FL) as described in “Methods”
  3. cNumber of gene loci mapped by 80% HQ FL reads to TAIR10
  4. dNovel transcripts: unannotated in TAIR10
  5. eAlternative polyadenylation (APA) sites
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Genome Biology

ISSN: 1474-760X

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