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Fig. 6 | Genome Biology

Fig. 6

From: Dynamic 3D genome architecture of cotton fiber reveals subgenome-coordinated chromatin topology for 4-staged single-cell differentiation

Fig. 6

The dynamic organization of TAD-like structure cliques during fiber development. a Heatmap showing chromatin interaction within the range of 0–14.34 Mb (with an zoom-in region of 12.46–14.34 Mb) in chromosome D01. Black boxes represent hot regions showing TAD-TAD interactions. b Pattern plot showing interactions in 12.46–14.34 Mb in chromosome D01. c Sankey plot showing reorganization of cliques at four stages during fiber development. d Bar plot showing the number of cliques with different sizes. e Proportion and numbers of cliques in A and B compartments. f Heatmap showing the intensity of TAD-TAD interaction. g Proportion of TAD-like structure involved in clique formation, loss, expansion, or reduction in A and B compartments. h Box plot showing the expression level of genes contained in cliques at different scales

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