From: JAFFAL: detecting fusion genes with long-read transcriptome sequencing
Direct RNA | cDNA | ||||||
---|---|---|---|---|---|---|---|
Total reads processed | 14,971,421 | 25,418,307 | |||||
Fusion genes | Break points | Reads support: median (range) | Fusion genes | Break points | Reads support: median (range) | ||
Fusion genes called by JAFFAL | High confidence | 4 | 4 | 4.5 (2–14) | 8 | 8 | 6 (2–24) |
Low confidence | 5 | 7 | 2 (2–11) | 94 | 121 | 2 (2–49) | |
Potential trans-splicing | 344 | 344 | 1 (1–1) | 412 | 412 | 1 (1–1) | |
Fusion genes called by longGF | > 1 Read support | 5 | 2 (2–14) | 173 | 2 (2–522) | ||
= 1 Read support | 713 | 1 (1–1) | 386 | 1 (1–1) |