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Table 7 The top 5 defined genomes determined by MetaMaps classification of the first 100,000 compost reads. Of the first 100,000 reads, 72,638 were long enough (> 1kb) for MetaMaps classification. Also shown are the number of contigs and total size of contigs mapping to the genome

From: Nanopore adaptive sampling: a tool for enrichment of low abundance species in metagenomic samples

Species

Reads per first 100k

(72,638 > 1kb)

Abundance % (based on mapped reads > 1kb)

Number of contigs

Total length of contigs

Hydrogenophaga sp. PBC

1183

1.63

17

3,982,409

Pseudoxanthomonas suwonensis

600

0.83

34

3,552,404

Thauera humireducens

403

0.55

19

2,280,334

Sphingopyxis granuli

330

0.45

19

3,534,465

Devosia sp. A16

307

0.43

9

804,967