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Table 1 Datasets

From: Universal prediction of cell-cycle position using transfer learning

Dataset

Species

Platform

# cells

Note

Reference

mNeurosphere

Mouse

10x

12805

 

here

mHippNPC

Mouse

10x

9188

 

here

mPancreas

Mouse

10x

3559

 

[32]

mHSC

Mouse

SMARTer

1343

 

[33]

mRetina

Mouse

10x

99260

 

[34]

HeLa 1

Human

Drop-seq

1398

 

[15]

HeLa 2

Human

Drop-seq

2463

 

[15]

mESC

Mouse

Fluidigm C1

279

FACS

[9]

hESC

Human

Fluidigm C1

226

FACS

[10]

hU2OS

Human

SMART-seq2

1114

FUCCI

[20]

hiPSCs

Human

Fluidigm C1

888

FUCCI

[14]

Fetal tissue atlas

Human

sci-RNA-seq3

Varies

 

[35]