Skip to main content

Table 3 Global (observed) contingency table

From: sPLINK: a hybrid federated tool as a robust alternative to meta-analysis in genome-wide association studies

 

Minor allele

Major allele

Total

Case

t = \((((\sum _{i=1}^{i=K} T^{\prime }_{i}) \mod \)p) - Nt) mod p

q = (((\(\sum _{i=1}^{i=K} q^{\prime }_{i}) \mod \)p) - Nq) mod p

t + q

Control

r = \((((\sum _{i=1}^{i=K} r^{\prime }_{i}\)) mod p) - Nr) mod p

s = (((\(\sum _{i=1}^{i=K} s^{\prime }_{i}) \mod \)p) - Ns) mod p

r+s

Total

t + r

q + s

2n