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Table 3 Global (observed) contingency table

From: sPLINK: a hybrid federated tool as a robust alternative to meta-analysis in genome-wide association studies

  Minor allele Major allele Total
Case t = \((((\sum _{i=1}^{i=K} T^{\prime }_{i}) \mod \)p) - Nt) mod p q = (((\(\sum _{i=1}^{i=K} q^{\prime }_{i}) \mod \)p) - Nq) mod p t + q
Control r = \((((\sum _{i=1}^{i=K} r^{\prime }_{i}\)) mod p) - Nr) mod p s = (((\(\sum _{i=1}^{i=K} s^{\prime }_{i}) \mod \)p) - Ns) mod p r+s
Total t + r q + s 2n