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Fig. 5 | Genome Biology

Fig. 5

From: Transcriptional landscape of highly lignified poplar stems at single-cell resolution

Fig. 5

scRNA-seq predicts potential gene redundancy. A Comparison of Jaccard index values between WGD-derived and random selected gene pairs. Asterisks indicate highly significant differences according to the Wilcoxon signed-rank test (P < 0.0001). B Boxplot showing that Jaccard index values of correlations between WGD-derived gene pairs decreased with increases in dN/dS. C Dot plot of GO enrichment analysis of paralogs within the top 10% of the Jaccard index. D Bar chart (top) and heatmap (bottom) showing the distribution of Jaccard index values of 5143 WGD-derived paralogs, and the distribution of the number of overlapping clusters, where both copies of a gene pair were expressed in more than 25% of the cells in that cluster. E Phylogenetic tree of CesA1/4/7/8 in P. alba var. pyramidalis and P. trichocarpa. F Frequency of Jaccard index between CesA7a and all other expressed genes. G Frequency of Jaccard index between CesA8a and all other expressed genes

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