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Fig. 3 | Genome Biology

Fig. 3

From: High-quality reference genome sequences of two coconut cultivars provide insights into evolution of monocot chromosomes and differentiation of fiber content and plant height

Fig. 3

Comparative genomic analysis between Cn. tall and Cn. dwarf. a Genome collinearity between Cn. tall and Cn. dwarf. The size less than 100 kb of colinear syntenic blocks are filtered out. b PAV distribution across the genomes of Cn. tall and Cn. dwarf. c The upper graph shows the percentage of PAVs with TEs in Cn. tall and Cn. dwarf. the other graph shows the distribution of PAVs in different gene parts. d Sequence comparison between Cn. tall genome and Cn. dwarf genome at chromosome 04 and 12, the figure below shows the expression of genes special presence in Cn. tall in different tissues of coconut. The values on the y-axis correspond to the expression levels of cellulose synthase A (GZ04G0103690) and gibberellin-regulated protein (GZ12G0246340). Cellulose synthase A, gibberellin-regulated protein, and other genes are indicated with blue, red, and grey, respectively. e Gene copy number and domain architecture of genes, which related to differences in Cn. tall (Cn. T), Cn. dwarf (Cn. D), E. guineensis (Eg), M. acuminate (Ma), and O. sativa (Os). The red numbers indicate differences in the number of genes between coconuts and other species

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Genome Biology

ISSN: 1474-760X

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