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Fig. 7 | Genome Biology

Fig. 7

From: Chromatin spatial organization of wild type and mutant peanuts reveals high-resolution genomic architecture and interaction alterations

Fig. 7

The regulatory network of plant height in the wild type (A) and the dwarf mutant (B). A, B The snapshot of the Wash U browser view shows chromatin loops and ATAC-seq in the wild type (H2014) and the dwarf mutant (H1314), respectively. Top, Hi-C contact map of a genomic region (22950000–23360000) on chr19; Second lane, insulation scores for TAD; third lane, the TAD regions sorted; fourth lane, loops sorted with red line; fifth lane, ATAC-seq peaks; bottom, gene annotation in the genomic region. C The column shows the relative content of GA in different tissues. The histological sections shown on both sides revealed the regular and irregular arrangement of cells in wild type and the mutant, respectively. D Heat map of GA2ox gene in different tissues. The regulatory pattern of endogenous GA levels by the Gibberellin 2 beta-dioxygenase (encoded by 1SCL5Q) through interacting with AP2EREBP. The phenotype of two peanut types shows the obvious differences in plant height

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