Skip to main content
Fig. 7 | Genome Biology

Fig. 7

From: A genome variation map provides insights into the genetics of walnut adaptation and agronomic traits

Fig. 7

Candidate causative gene for walnut endopleura color. a Manhattan plot of GWAS for color of walnut endopleura. The homolog of ANR (JreChr09G12363) located in this region is highlighted. Walnut fruits with contrasting bright and dark colors are shown. b Zoomed-in plot for the GWAS peak associated with endopleura color. SNPs in theA NR gene are highlighted. c Relationship between the biosynthesis of condensed tannins and anthocyanins. d Identification of ortholog of AtANR in walnut (left). Expression profiles of ANR homologs at different developmental stages of embryo and endopleura in walnut (right). Three replicates for each time point. e Expression levels of JreChr09G12363 (JrANR) at different days after pollination. f Conservation level (based on the SIFT score) of nonsynonymous SNPs in the ANR gene. g Comparison of walnut endopleura color for samples with different alleles for the potentially causative SNP (9_7499782). **P < 0.01, Student’s t test

Back to article page