Fig. 5
From: A genome variation map provides insights into the genetics of walnut adaptation and agronomic traits
Genomic loci associated with environmental factors. a Summarized genomic loci associated with environmental factors related to temperature, precipitation, and altitude. The major-effect genomic loci associated with temperature, precipitation, and altitude are highlighted with red, blue, and green arrays, respectively. b Manhattan plots for annual mean temperature (bio1), annual precipitation (bio12), and altitude. c Phylogenetic tree for the genes of J. regia and A. thaliana in the phosphatidylethanolamine-binding protein (PEBP) gene family. The branches for subfamilies TFL1-like, FT-like, and MFT-like are colored in blue, red, and green, respectively. d A zoomed-in plot for the loci on chromosome 13 associated with temperature. One SNP located in the promoter region of JrATC is within the peak region. e A zoomed-in plot for the loci on chromosome 3 associated with altitude. f JrLDOX is located in the selected genomic region identified in Tibetan walnut population