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Table 4 Spearman correlation gap for WGAN-GP, InfoWGAN-GP, PCA, MichiGAN-PCA, VAE, β-TCVAE, and MichiGAN on the two splatter-simulated single-cell RNA-seq datasets

From: MichiGAN: sampling from disentangled representations of single-cell data using generative adversarial networks

Model Linear step Non-linear step
WGAN-GP 0.07 ±0.02 0.10 ±0.06
InfoWGAN-GP 0.05 ±0.05 0.04 ±0.02
PCA 0.68 ±0.00 0.72 ±0.00
MichiGAN-PCA 0.65 ±0.01 0.68 ±0.00
VAE 0.3 ±0.04 0.27 ±0.07
β-TCVAE 0.18 ±0.05 0.16 ±0.06
MichiGAN 0.18 ±0.04 0.15 ±0.05
  1. The mean and standard deviation are presented for each method over 5 runs