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Table 3 Disentanglement metrics for three PROSSTT-simulated single-cell RNA-seq datasets with three ground truth variables

From: MichiGAN: sampling from disentangled representations of single-cell data using generative adversarial networks

  

FactorVAE metric ↑

MIG ↑

3 trajectories

PCA

0.54

0.10

 

VAE

0.58

0.08

 

β-TCVAE

0.64

0.27

4 trajectories

PCA

0.59

0.12

 

VAE

0.61

0.12

 

β-TCVAE

0.72

0.15

5 trajectories

PCA

0.59

0.06

 

VAE

0.53

0.06

 

β-TCVAE

0.62

0.26

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Genome Biology

ISSN: 1474-760X

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