Skip to main content
Fig. 4 | Genome Biology

Fig. 4

From: Subtype-associated epigenomic landscape and 3D genome structure in bladder cancer

Fig. 4

Chromatin interactions induced by structure variation (SV) events. a, b Circos plot showing intra- and inter-chromosome SVs in SCABER (a) and SW780 (b). c A large intra-chromosomal translocation on chr9. d–h Inter-chromosomal translocations. The breakpoints were identified by the HiCBreakfinder software. We then reconstructed the local Hi-C maps across the breakpoints. RNA-Seq and H3K27ac ChIP-Seq tracks from the same cell type are shown below the Hi-C maps

Back to article page