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Fig. 8 | Genome Biology

Fig. 8

From: ACME dissociation: a versatile cell fixation-dissociation method for single-cell transcriptomics

Fig. 8

Integrative analysis of planarian trypsin- and ACME-dissociated datasets. a Analysis workflow. b UMAP visualization of 21,610 trypsin-dissociated S. mediterranea cells reanalyzed from Plass et al., colored by cluster identity and annotated on the basis of marker genes. c UMAP visualization of 19,025 ACME-dissociated S. mediterranea cells colored by transfer label analysis from trypsin-dissociated cell analysis (a). The numbers in the plot denote the center of the cells transferred with each of the trypsin-dissociated cell clusters. d UMAP visualization of 40,635 cells integrating trypsin-dissociated and ACME-dissociated cells. Clusters are colored by transfer label analysis from ACME-dissociated cell analysis

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