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Table 1 Q scores and numbers of mismatch, insertion, and deletion errors of P. aeruginosa in the metagenomic dataset

From: Homopolish: a method for the removal of systematic errors in nanopore sequencing by homologous polishing

Methods Avg. Q score Median Q score Mismatches Insertions Deletions
Flye 26.39 26.5 738 14394 439
Racon 4x 32.78 33.19 622 538 2417
Racon 4x + Medaka 36.54 37.96 476 704 324
Racon 4x + Hompolish 39.43 43.01 622 24 128
MarginPolish 34.93 35.85 449 1096 637
MarginPolish + HELEN 41.48 46.99 149 78 256
MarginPolish + Homopolish 40.74 50 440 7 126
Racon 4x + Medaka + Homopolish 40.55 46.99 474 4 120
MarginPolish + HELEN + Homopolish 42.81 90 205 5 146