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Table 3 Average (pairwise) Spearman correlations of base coverage

From: ReSeq simulates realistic Illumina high-throughput sequencing data

 

Lane

Library

Real

Simulation

Real

0.91

0.92

-

-

ReSeq

-

-

0.23

0.81

ART

-

-

0.01

0.00

pIRS

-

-

0.12

1.00

NEAT

-

-

0.10

0.26

BEAR

-

-

− 0.00

0.05

  1. The bold numbers highlight the simulators, which are the closest to the correlatedness of real data in the given category. Lane: Ec-Hi4000-Nextera (Ecoli1_L001) and replicates Ecoli1_L002 and Ecoli1_L003. Library: Ec-Hi4000-Nextera (Ecoli1_L001) and replicates Ecoli2_L001 and Ecoli3_L001. Real: Ec-Hi4000-Nextera and three simulations. Simulation: Three simulations of Ec-Hi4000-Nextera
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Genome Biology

ISSN: 1474-760X

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