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Table 2 Summary of the circum-basmati rice genome assemblies

From: Nanopore sequencing-based genome assembly and evolutionary genomics of circum-basmati rice

 

Basmati 334

Dom Sufid

Genome coverage

62.5×

51.4×

Number of contigs

188

116

Total number of bases in contigs

386,555,741

383,636,250

Total number of bases scaffolded

386,050,525

383,245,802

Contig N50 length

6.32 Mb

10.53 Mb

Contig L50

20

13

Total contigs > 50 kbp

159

104

Maximum contig length

17.04 Mb

26.82 Mb

BUSCO gene completion (assembly)

97.6%

97.0%

GC content

43.6%

43.7%

Repeat content

44.4%

44.2%

Number of annotated genes

41,270

38,329

BUSCO gene completion (annotation)

95.4%

93.6%