Fig. 2
From: Nanopore sequencing-based genome assembly and evolutionary genomics of circum-basmati rice
Circum-basmati gene sequence evolution. a The deletion frequency of genes annotated from the Basmati 334 and Dom Sufid genomes. Frequency was estimated from sequencing data on a population of 78 circum-basmati varieties. b Groups of orthologous and paralogous genes (i.e., orthogroups) identified in the reference genomes of circum-aus N22, japonica Nipponbare (NPB), and indica R498, as well as the circum-basmati genome assemblies Basmati 334 (B334) and Dom Sufid (DS) of this study. c Visualization of the genomic region orthologous to the Nipponbare gene Os03g0418600 (Awn3-1) in the N22, Basmati 334, and Dom Sufid genomes. Regions orthologous to Awn3-1 are indicated with a dotted box