Table 1 Genome coverage and N50 for the long reads of the child (C), father (F), and mother (M) in 4 Icelandic trios (I1-4) and one Ashkenazim trio (H)
From: Ratatosk: hybrid error correction of long reads enables accurate variant calling and assembly
Sequencing | Coverage | N50 | |||||
|---|---|---|---|---|---|---|---|
platform | C | F | M | C | F | M | |
I1 | ONT | 63.68 | 50.94 | 64.74 | 20,353 | 24,093 | 23,528 |
I2 | ONT | 55.68 | 67.95 | 70.46 | 25,767 | 22,496 | 20,439 |
I3 | ONT | 69.50 | 57.05 | 56.62 | 24,047 | 27,787 | 26,856 |
I4 | ONT | 57.07 | 57.40 | 64.28 | 23,111 | 15,234 | 26,634 |
HO | ONT | 46.72 | 85.23 | 87.60 | 52,311 | 45,924 | 49,285 |
HP | PacBio | 73.85 | 35.03 | 32.77 | 11,065 | 10,691 | 10,617 |