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Table 1 Summary of statistics for the RYP1 genome assembly compared with the published Lovell v2.0 reference genome

From: Genome structure variation analyses of peach reveal population dynamics and a 1.67 Mb causal inversion for fruit shape

Category RYP1 Lovell v2.0
Total assembly size (Mb) 239.1 227.4b
Number of contigs 87 2525b
Largest contigs (Mb) 25.9 1.5b
Contig N50 11.5 Mb 255.4 kbb
Sequences anchored to chromosomes (Mb) 235.0 225.7b
Genomic GC content (%) 37.6 37.0
Number of gaps 54 1828
Complete BUSCOs (%)a 97.4 97.6
LTR assembly index, LAI 22.33 21.29
Intact LTR length (Mb)/number 10.50/1656 8.84/1416
Repetitive sequences (Mb)/(%) 115.01/48.11 101.99/44.85
Protein-coding genes 32,604 31,972b
Transcripts 37,827 47,089
Average gene length (bp) 2223 2215
  1. aThe analysis from comparisons with the embryophyta_odb9 database
  2. bThe statistic values taken from the previous publication [22]