Fig. 6
From: BlastFrost: fast querying of 100,000s of bacterial genomes in Bifrost graphs
Genetic and serovar associations of 20,490 Salmonella genomes containing QRDR variants of genes gyrA, gyrB, and parE that are associated with fluoroquinolone resistance [27]. a Neighbor-joining tree based on cgMLST distances (visualized in GrapeTree [5]), colored by the Salmonella serovar in EnteroBase [3] based on SISTR1 [42] analyses of draft genomes. b Distribution of mutated genes by serovar for the ten most frequent serovars in a. c, d Percentage of individual nucleotide mutations, and their combinations for frequent (c) and for rare (d) mutations