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Fig. 5 | Genome Biology

Fig. 5

From: BlastFrost: fast querying of 100,000s of bacterial genomes in Bifrost graphs

Fig. 5

BlastFrost presence/absence analysis for 44 genes of the Salmonella SPI-2 pathogenicity island among 926 representative Salmonella genomes [20]. The outermost circle consists of one segment for each genome from Salmonella bongori and multiple subspecies of Salmonella enterica, color coded by species/subspecies (key; external text). The internal concentric circles correspond to each of the genes within SPI-2 (figure legend). Dark green: hits identified by both exact (d=0) and inexact (d=2) searches; light green: hits identified only by the inexact search; white: no hits. Graphical representation was done with Anvi’o [41]

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