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Table 1 Assembly and validation statistics of two haplotype-resolved genome assemblies

From: Gamete binning: chromosome-level and haplotype-resolved genome assembly enabled by high-throughput single-cell sequencing of gamete genomes

Haploid assemblies of “Rojo Pasión” Genome-specific k-mers common with parental WGS Precision in haplotyping Size [Mb] Chromosome scaffolds Contig N50 [Mb] N50 [Mb] Protein-coding genes (total genes)
“Currot” “Orange Red”
“Currot” haplotype 12,983,934 129,874 99.1% 216.0 8 0.662 25.8 30,661 (52,472)
“Orange Red” haplotype 81,422 16,807,958 99.5% 215.2 8 0.664 25.5 30,378 (51,701)
  1. The eight main chromosome-level scaffolds of each haplotype made up ~ 99% of the respective assembly