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Table 2 Assessment of similarity criteria between the results of various resolutions and raw/normalized matrix

From: SuperTAD: robust detection of hierarchical topologically associated domains with optimized structural information

   

SuperTAD(2)

deDoc

GM12878

25 vs. 50 (kb)

OR

0.81

red0.83

  

WS

0.85

red0.87

  

MoC

0.71

red0.73

 

Raw vs. KR (average between 25 and 50 kb)

OR

red0.92

0.83

  

WS

red0.93

0.88

  

MoC

red0.90

0.77

IMR90

25 vs. 50 (kb)

OR

red0.88

0.79

  

WS

red0.90

0.83

  

MoC

red0.75

0.67

 

Raw vs. KR (average between 25 and 50 kb)

OR

red0.93

0.88

  

WS

red0.95

0.91

  

MoC

red0.89

0.83

  1. The larger value is labeled in red for each line
  2. OR overlapping ratio, WS weighted similarity, MoC measure of concordance
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Genome Biology

ISSN: 1474-760X

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