Fig. 2

The statistics of TAD attributes for all the methods. We apply all the methods on KR (normalized) Hi-C matrix at 25-kb bin resolution for two human cell lines (GM12878 and IMR90). The boxplots show the statistics on a length, b structural entropy, and c contact density of TADs detected by all the methods. Each boxplot shows the value distribution of each method for each cell line, and all share the legend in c. The dashed lines in red and the solid lines indicate the mean and median value for each box. d The total structural entropy of the coding tree for each method. A lower bar corresponds to a coding tree with less structural entropy