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Fig. 1 | Genome Biology

Fig. 1

From: HiDeF: identifying persistent structures in multiscale ‘omics data

Fig. 1

Identification of persistent communities with HiDeF. a ‘Omics data often contain community structures at different spatial resolutions. Increasing the resolution of the analysis generally increases the number of communities and decreases the average community size. b Pan-resolution community detection yields a candidate pool of communities. Communities that are robustly identified across a wide range of resolutions are considered persistent and retained. c Set containment analysis is used to define the relationships between communities, leading to d the final hierarchical model, in which vertices of increasing depths from the root represent communities of increasingly high resolutions

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