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Table 2 Performance of sequence-to-graph mapping

From: The design and construction of reference pangenome graphs with minigraph

 

Minigraph

GraphAligner

Indexing time (wall-clock sec)

100

589

Mapping time (wall-clock sec)

79

140

Peak RAM (GB)

19.5

27.2

Percent unmapped reads

0.5%

0%

Percent wrong mappings

1.7%

4.6%