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Fig. 3 | Genome Biology

Fig. 3

From: iMOKA: k-mer based software to analyze large collections of sequencing data

Fig. 3

iMOKA accurately predicts response to chemotherapy in ovarian cancer. a The features output by all benchmarked approaches are evaluated for their capacity to classify response to chemotherapy. Classification oob score is plotted as a function of the number of features output by each approach. b Screenshot of the iMOKA output showing each k-mer sequence that maps to a SNV, their importance in the classification, where these sequences map to on the genome, and what genomic feature they correspond to. c Screenshot of the IDUA SNV detected by iMOKA. d Gene ontology of the genes overlapped by the k-mers found by iMOKA

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