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Table 1 Datasets analyzed in the present study

From: Removing reference bias and improving indel calling in ancient DNA data analysis by mapping to a sequence variation graph

Dataset

Number of individuals

Genomic coverage

Treatment

Type

Region

Damgaard et al. 2018

2

11.24-18.95x

Untreated

Whole-genome shotgun sequencing

Kazakhstan

Martiniano et al. 2016

9

0.54-1.63x

Untreated

Whole-genome shotgun sequencing

UK

Schiffels et al. 2016

10

0.47-7.86x

Partial UDG/USER

Whole-genome shotgun sequencing

UK

Posth et al. 2018

13

0.02-0.40x

Partial UDG

Target capture

South America