Fig. 6
From: Haplotype threading: accurate polyploid phasing from long reads
Visualization of the threading. a Clusters of reads are represented as gray shapes with their horizontal span indicating the covered variants and the height being the respective coverage. The k=4 threads are shown as colored lines passing through the clusters. Multiple threads can co-enter the same cluster if the coverage is suited. b Alternative threading with the same score in our model. Two positions cause ambiguity and allow switches in the threading compared to a. These are candidate cut positions to prevent switch errors in the final phasing