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Fig. 5 | Genome Biology

Fig. 5

From: Haplotype threading: accurate polyploid phasing from long reads

Fig. 5

Cluster editing example. The input graph on the left contains one node per read and positive weighted edges (blue) for similar reads and negative weighted edges (pink) for dissimilar reads. All other edges are zero-edges and not drawn for sake of simplicity. The model considers blue edges as present edges and pink edges as missing edges, as shown in the second graph. The information of the pink edges is still used as insertion cost for missing edges. The third graph indicates operations needed to get a clique graph as dashed edges. The blue edges need to be deleted, and the pink needs to be inserted. The final clique graph is shown on the right

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