Table 2 Scores of assemblies of simulated data
From: A systematic comparison of chloroplast genome assembly tools
| Â | Data set | CAP | CE | Fast-Plast | GetOrganelle | IOGA | NOVOPlasty | org.ASM |
|---|---|---|---|---|---|---|---|---|
1 | sim_150bp.0-1 | 79.10 | 100.00 | 99.48 | 100.00 | Â | 91.52 | 100.00 |
2 | sim_150bp.0-1.2M | 79.10 | 100.00 | 99.72 | 100.00 | 79.10 | 91.52 | 91.50 |
3 | sim_150bp.1-10 | Â | 56.44 | 100.00 | 76.98 | Â | 91.52 | 78.00 |
4 | sim_150bp.1-10.2M | Â | Â | 99.97 | 100.00 | Â | 91.52 | 82.72 |
5 | sim_150bp.1-100 | 75.72 | 100.00 | 99.48 | 100.00 | 66.09 | 91.52 | 91.50 |
6 | sim_150bp.1-100.2M | Â | 100.00 | 99.47 | 100.00 | Â | 100.00 | 100.00 |
7 | sim_150bp.1-1000 | 79.10 | Â | 99.72 | 100.00 | Â | 91.52 | 100.00 |
8 | sim_150bp.1-1000.2M | 79.10 | 100.00 | 99.72 | 100.00 | Â | 91.52 | 100.00 |
9 | sim_250bp.0-1 | 79.10 | 100.00 | 93.82 | 100.00 | Â | 91.52 | 91.50 |
10 | sim_250bp.0-1.2M | 79.10 | 100.00 | 93.83 | 100.00 | Â | 91.52 | 91.50 |
11 | sim_250bp.1-10 | Â | 54.98 | 68.45 | 78.89 | 52.71 | 91.52 | 40.20 |
12 | sim_250bp.1-10.2M | Â | Â | 93.00 | 100.00 | 52.67 | 87.40 | 40.20 |
13 | sim_250bp.1-100 | 72.81 | 100.00 | 93.82 | 100.00 | Â | 87.40 | 100.00 |
14 | sim_250bp.1-100.2M | Â | 100.00 | 93.83 | 100.00 | Â | 87.40 | 100.00 |
15 | sim_250bp.1-1000 | 79.10 | 21.30 | 93.83 | 100.00 | 76.96 | 91.52 | 91.50 |
16 | sim_250bp.1-1000.2M | 79.10 | 100.00 | 93.83 | 100.00 | 67.55 | 87.40 | 100.00 |