Fig. 4
From: Alignment and mapping methodology influence transcript abundance estimation
Performance of each method on bulk datasets simulated using Polyester. The top half of the matrix shows swarm plots of pairwise correlations of counts predicted by the different approaches with each other and with the true read counts on the simulated samples generated using the experimentally derived abundances from Bowtie2 and Salmon. The bottom half shows the average Spearman correlations between the different methods across the 109 simulated datasets