Table 2 Unitig N50, k-mer, and unitig cardinalities in cdBGs built from NA12878 for different k-mer sizes
From: Bifrost: highly parallel construction and indexing of colored and compacted de Bruijn graphs
k-mer size | k-mer cardinality | Unitig cardinality | Unitig N50 |
|---|---|---|---|
31 | 2,675,559,250 | 80,478,269 | 421 |
63 | 2,991,703,769 | 28,262,463 | 950 |
95 | 3,058,681,425 | 16,691,669 | 1299 |
127 | 2,702,556,396 | 44,221,433 | 297 |