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Fig. 1 | Genome Biology

Fig. 1

From: Integrative analyses of single-cell transcriptome and regulome using MAESTRO

Fig. 1

An overview of the MAESTRO workflow. Starting from fastq files, MAESTRO performs pre-processing, alignment, quality control, expression index for scRNA-seq, peak calling for scATAC-seq, clustering, differential analysis, cell-type annotation, and transcription factor identification analysis. If scRNA-seq and scATAC-seq from the same experiment are given, MAESTRO can perform the integration analysis and annotate the integrated clusters

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