Skip to main content
Fig. 1 | Genome Biology

Fig. 1

From: Contiguous and stochastic CHH methylation patterns of plant DRM2 and CMT2 revealed by single-read methylome analysis

Fig. 1

Pipeline for analysing variation of single-read data regarding CHH-methylated regions. a Schematic representation of pipeline: regions of up to a set length in base pairs with set number of CHH sites are selected; reads overlapping these sites are then quantified by the number of methylated CHH sites. b Schematic representation of different types of variation within methylated regions: (i) among-site variation, relating to differences in methylation average between adjacent CHH sites; (ii) read methylation variation, relating to differences in methylation level among reads overlapping the same region, taken to represent the sample population of cells; and (iii) stochasticity, relating to differences between adjacent CHH sites within each read

Back to article page