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Table 2 DNS scores for TE superfamilies

From: Differential chromatin accessibility landscape reveals structural and functional features of the allopolyploid wheat chromosomes

TE class

TE family

A genome

B genome

D genome

Mean

SD

Mean

SD

Mean

SD

Class 1

RLG

− 0.0043

0.166

− 0.0131

0.268

− 0.00381

0.174

RLC

0.0087

0.156

0.0056

0.191

0.0146

0.152

RLX

− 0.0217

0.185

− 0.0244

0.297

− 0.0189

0.180

RIX

0.0353

0.248

0.0262

0.230

0.0364

0.239

Class 2

DTC

0.0352

0.438

0.0248

0.981

0.0229

0.815

DTM

0.0854

0.205

0.0744

0.202

0.0770

0.195

DTH

0.1106

0.250

0.0867

0.252

0.0994

0.243

DTT

0.2396

0.259

0.2318

0.261

0.2245

0.256

DTX

0.2079

0.262

0.1939

0.271

0.2151

0.261

DXX

0.0736

0.329

0.0531

0.252

0.1011

0.211

Unclassified

XXX

0.0171

1.862

− 0.0878

3.669

− 0.0544

3.579

  1. DNS mean score for each TE family across the length of the annotated TEs (Wicker et al. [34])
  2. Standard deviation of DNS score for each TE family