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Fig. 1 | Genome Biology

Fig. 1

From: SURF: integrative analysis of a compendium of RNA-seq and CLIP-seq datasets highlights complex governing of alternative transcriptional regulation by RNA-binding proteins

Fig. 1

A skipped exon (SE) event in the PARP6 gene upon AQR knockdown. a The 18th exon (red box) of PARP6 gene model (GENCODE version 24), which resides in the minus strand. b The normalized read coverage in two replicates of wild-type RNA-seq. c The normalized read coverage in two replicates of shRNA AQR knockdown followed by RNA-seq. The 18th exon exhibits a decreased relative exon usage. d The normalized read coverage in two replicates of AQR eCLIP-seq, with two peaks at the upstream intron

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Genome Biology

ISSN: 1474-760X

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