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Table 3 Cell membership agreement between reference (R) and clustering results (C)

From: Accounting for cell type hierarchy in evaluating single cell RNA-seq clustering

 

C

R

1

2

\(\dots \)

i

\(\dots \)

I

 

1

n11

n12

 

n1i

 

n1I

n1+

2

n21

n22

 

n2i

 

n2I

n2+

⋯

⋯

⋯

 

⋯

 

⋯

⋯

j

nj1

nj2

 

nji

 

njI

nj+

⋯

⋯

⋯

 

⋯

 

⋯

⋯

J

nJ1

nJ2

 

nJi

 

nJI

nJ+

 

n+1

n+2

 

n+i

 

n+I

n

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Genome Biology

ISSN: 1474-760X

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