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Fig. 5 | Genome Biology

Fig. 5

From: scATAC-pro: a comprehensive workbench for single-cell chromatin accessibility sequencing data

Fig. 5

Visualization of scATAC-seq data. (A) Chromatin accessibility signal of single cells. Normalized chromatin accessibility signal for peaks overlapping with transcriptional start sites of selected marker genes. Data is visualized by automatically calling VisCello. (B) Chromatin accessibility signal of aggregated cells. Genome browser view of normalized chromatin accessibility signal at the CD14 locus across cell clusters. (C) Cell type assignment based on chromatin accessibility signals of known cell type marker genes. Inset, clustering result without cell type assignment

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