Fig. 8

Violin plots of AUC ROC values obtained on ChIP-seq data sets for TFs of a particular TFClass family by PWMs belonging to TFs of the same family and representative motifs of the family selected using the PWM clustering-by-similarity. a Ets-related factors, b Forkhead box (FOX) factors, and c factors with multiple dispersed zinc fingers. All AUC ROC values are obtained using data sets of TFs from the selected family. The first 4 violins of each plot show AUC ROC values of (1) all PWMs of TFs from the selected family, (2) the best PWM (with the highest average AUC ROC) from the family, (3) the best PWM from all tested, and (4) family representatives obtained by the motif similarity clustering. The next violins of each plot show AUC ROC values achieved by particular representative PWMs belonging to the family and selected from the motif clustering by similarity