Fig. 5

Alluvial plots illustrating the performance of PWMs from particular CIS-BP TF families in ChIP-seq (a), SELEX 10% (b), and PBM (c) benchmarks. For each TF, PWMs with the highest average AUC ROC (a, b) or Pearson correlation coefficient (c) across the data sets for this TF are used to construct the links. PWMs grouped by CIS-BP TF family are shown on the left; TFs are shown on the right. The link width corresponds to the number of TFs. Only TFs with at least one ChIP-seq data set and one HT-SELEX data set are included. For illustration, selected motif families are highlighted with color