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Fig. 2 | Genome Biology

Fig. 2

From: Completing the ENCODE3 compendium yields accurate imputations across a variety of assays and human biosamples

Fig. 2

Avocado imputes epigenomic experiments accurately. a Example signal, corresponding imputations, and the average activity of that assay, for six assays performed in HepG2. The figure includes representative tracks for RNA-seq, histone modification, and factor binding. The data covers 350 kbp of chromosome 20. b Performance measures evaluated in aggregate over all experiments from all biosamples in chromosomes 12 through 22. Orange bars show the performance of the average activity baseline, and green bars show the performance of Avocado’s imputations. c Performance measures evaluated for each assay, with Avocado’s error (y-axis) compared against the error of the average activity (x-axis). The number of assays in which Avocado outperforms the average activity is denoted in green for each metric, and the number of assays in which Avocado underperforms the average activity is denoted in orange

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