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Fig. 6 | Genome Biology

Fig. 6

From: Avocado: a multi-scale deep tensor factorization method learns a latent representation of the human epigenome

Fig. 6

The predicted H3K4me3 signal and corresponding attributions for two cell types in the same region of chromosome 20. a The prediction and attributions for GM12878, where a tall peak on the right is paired with two much smaller peaks to the left. Many short regions have a positive genomic attribution but a negative cell type attribution that masks them. b The prediction and attributions for the duodenum smooth muscle. A prominent peak is now predicted on the left, corresponding with a swap from a negative cell type attribution to a positive one. The same short regions that previously were masked by the cell type attributions now have positive cell type attributions and exhibit peaks in the imputed signal

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