Table 2 Summary of external evaluations for semi-supervised methods
From: A comparison framework and guideline of clustering methods for mass cytometry data
Datasets | Methods | External evaluations | |||
|---|---|---|---|---|---|
Accuracy | F-measure | NMI | ARI | ||
Cell Cycle | ACDC | 0.8342 ± 0.0071 | 0.8466 ± 0.0093 | 0.4325 ± 0.0212 | 0.5579 ± 0.0129 |
LDA | 0.9095 ± 0.0006 | 0.9110 ± 0.0005 | 0.6189 ± 0.0032 | 0.7225 ± 0.0021 | |
Colon | ACDC | 0.7439 ± 0.0026 | 0.7874 ± 0.0076 | 0.5705 ± 0.0088 | 0.5952 ± 0.0041 |
LDA | 0.8576 ± 0.0011 | 0.8587 ± 0.0012 | 0.7410 ± 0.0012 | 0.7626 ± 0.0017 | |
Levine13dim | ACDC | 0.9010 ± 0.0029 | 0.9275 ± 0.0026 | 0.8635 ± 0.0041 | 0.9011 ± 0.0052 |
LDA | 0.9582 ± 0.0005 | 0.9586 ± 0.0005 | 0.9275 ± 0.0008 | 0.9539 ± 0.0007 | |
Levine32dim | ACDC | 0.9943 ± 0.0006 | 0.9939 ± 0.0007 | 0.9380 ± 0.0052 | 0.9791 ± 0.0020 |
LDA | 0.9809 ± 0.0003 | 0.9807 ± 0.0004 | 0.9595 ± 0.0006 | 0.9830 ± 0.0002 | |
Muscle | ACDC | 0.8787 ± 0.0101 | 0.8784 ± 0.0089 | 0.6750 ± 0.0168 | 0.7593 ± 0.0190 |
LDA | 0.9240 ± 0.0011 | 0.9238 ± 0.0011 | 0.7606 ± 0.0031 | 0.8295 ± 0.0031 | |
Samusik01 | ACDC | 0.9682 ± 0.0027 | 0.9731 ± 0.0019 | 0.9347 ± 0.0047 | 0.9616 ± 0.0021 |
LDA | 0.9757 ± 0.0002 | 0.9759 ± 0.0002 | 0.9482 ± 0.0004 | 0.9735 ± 0.0005 | |