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Table 1 Structural differences identified by SyRI and corresponding computational resources

From: SyRI: finding genomic rearrangements and local sequence differences from whole-genome assemblies

SpeciesSampleAssembly sizeCPU runtime (in seconds)Memory usage (in MB) Syntenic regionsStructural rearrangementsUn-aligned
InversionTranslocationDuplication
HumanNA128783.03 Gb542.71581Size2.8 Gb7.0 Mb11.6 Mb27.9 Mb224.1 Mb
% genome91.10.20.40.97.4
Number1147662703766840
NA192403.04 Gb528.791003Size2.8 Gb3.7 Mb11.8 Mb27.1 Mb208.8 Mb
% genome91.70.10.40.96.9
Number1134682543429848
YeastYJM144712.1 Mb34.515Size11.2 Mb1.8 kb92.0 kb629.6 kb87.3 kb
% genome92.50.020.86.00.7
Number222354370164
Fruit FlyA4135.5 Mb522.02289Size124.8 Mb119.5 kb2.0 Mb7.5 Mb1.2 Mb
% genome92.10.11.45.50.8
Number19471563643871365
MaizePH2072.06 Gb3342.625873Size1.3 Gb82.5 Mb10.1 Mb15.9 Mb669.6 Mb
% genome62.24.00.50.832.5
Number87791953954961215,166