From: TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools
 | Zavitan | Chinese Spring | ||
---|---|---|---|---|
TRITEX | Avni et al. [8] | TRITEX | IWGSC [4] | |
Unitig assembly size | 10.8 Gb |  | 15.1 Gb |  |
Unitig N50 | 21.7 kb |  | 21.4 kb |  |
Unitig N90 | 1.5 kb |  | 1.7 kb |  |
Assembled sequence in contigs ≥ 1 kb | 10.0 Gb |  | 14.0 Gb |  |
Assembled sequence in contigs ≥ 10 kb | 7.8 Gb |  | 10.8 Gb |  |
Scaffold assembly size | 11.1 Gb | 10.5 Gb | 15.7 Gb | 14.5 Gb |
Scaffold N50 | 1.3 Mb | 7.0 Mb | 2.3 Mb | 7.0 Mb |
Scaffold N90 | 97 kb | 1.2 Mb | 281 kb | 1.2 Mb |
Assembled sequence in scaffolds ≥ 1 kb | 10.4 Gb | 10.5 Gb | 14.8 Gb | 14.5 Gb |
Assembled sequence in scaffolds ≥ 1 Mb | 6.7 Gb | 9.6 Gb | 11.9 Gb | 13.4 Gb |
Unfilled internal gaps | 209 Mb (1.9%) | 171 Mb (1.6%) | 476 Mb (3.0%) | 262 Mb (1.8%) |